Thomas' situation is simply a matter of money. Thomas apparently has asked for a Designated Player contract, something that the Rapids likely can't afford with their current cap situation — whether he's actually worth a DP contract after a slightly less impressive second year than first year is also up for discussion. Reportedly, there's still discussion concerning him, but things don't look particularly good.
Chris Bianchi put out an interesting tidbit on the situation yesterday, saying that both players might be staying in MLS if they aren't with the Rapids next year (they won't be with the Rapids next year.) Can the Rapids get something via trades for their rights? It'll be something to watch.
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Matt Pollard 